PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_19333-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 881aa    MW: 96767.1 Da    PI: 6.3906
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_19333-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.44.5e-26520582152
           RWP-RK   1 aekeisledlskyFslpikdAAkeLg...........vclTvLKriCRqyGIkRWPhRkiksl 52 
                      aek+isle+l++yFs+++k+AAk+Lg           +c+T++KriCRq+GI+RWP+Rki+++
  TRIUR3_19333-P1 520 AEKTISLEVLQQYFSGSLKNAAKSLGglkwqqnvaacMCPTTMKRICRQHGISRWPSRKINKV 582
                      589**********************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151914.845510602IPR003035RWP-RK domain
PfamPF020422.3E-23523582IPR003035RWP-RK domain
SuperFamilySSF542773.27E-22778872No hitNo description
SMARTSM006661.8E-24787869IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2409.9E-26787868No hitNo description
PROSITE profilePS5174519.817787869IPR000270PB1 domain
PfamPF005643.9E-15787868IPR000270PB1 domain
CDDcd064071.07E-33788868No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0010118Biological Processstomatal movement
GO:0010167Biological Processresponse to nitrate
GO:0042128Biological Processnitrate assimilation
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 881 aa     Download sequence    Send to blast
MPIEVGPAPA AAPDNTTAVA EETQRARSGN SDTPIKKTER LNNKWQFNLA LHDDSTNSSC  60
LFKEKLTHAL RYFKESTDQH LLVQVWAPVK SGDRYVLTTS GQPFVLDHQS IGLLQYRAVS  120
MMYMFSVDGD NAGELGLPGR VYKQKVPEWT PNVQYYSSTE YPRLNHAISY NVHGTVALPV  180
FDPSVQSCIA VVELIMTSKK INYADEVDKV CKALEAVNLK STEILEHPNV QICNEGRQSA  240
LVEILEILTV VCEEHKLPLA QTWVPCKYRS VLAHGGGVKK SCLSFDGSCM GEVCMSTSDV  300
AFHVIDAHMW GFRDACVEHH LQKGQGVSGK AFIYHRPCFS KDISQFCKLE YPLVHYARMF  360
GLAGCFAICL QSPYTGDDYY MLEFFLPPSC KEEDDQNALL ESILGLIHQC LRNLKVAGNG  420
ESNEASLQLS NVIMIESEDF KTNVHFENPE GFRESPEGDT HGGAHEFDKA NSKVSEGHLL  480
ADDNSQNNGV SVSRPNGSAA SDSSLLHKNG KPPERRRGKA EKTISLEVLQ QYFSGSLKNA  540
AKSLGGLKWQ QNVAACMCPT TMKRICRQHG ISRWPSRKIN KVNRSLSKLK QVIESVQGSD  600
AAFNLTSITG PLPTIPVGPS SDSFNKEKAS ESKAEHSNRA VDGDRDSSLQ KPQENGSHFG  660
ALMSQQGFAD TGNNVQLEAD KASLSRSSSG EGSINSRTSE GSCQGSPANQ TFVCQPIASM  720
FLEPQEPQLN PEGFTKEPFQ EPELPLSRML IEDSGSSKDL KNLFGSAIGQ PMLAPPSNFG  780
PMRNSGTVTI KASFKEDIVR FRFPCSSSVM ALKDEVAKRL RMDAGMFDIK YLDDDHEWVK  840
LACNADLEEC IEISRHSGTH VIRLLVTDVA AHIGSSCGSS G
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00449DAPTransfer from AT4G24020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003565547.10.0PREDICTED: protein NLP3
SwissprotQ5NB820.0NLP3_ORYSJ; Protein NLP3
TrEMBLM7ZGU80.0M7ZGU8_TRIUA; Protein NLP3
STRINGBRADI2G08177.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47783660
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.10.0NIN like protein 7